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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs7006615 chr8:71639807 T/A XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs7007450 chr8:71640269 T/C XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs7009297 chr8:71672366 A/G XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs7012404 chr8:71668698 T/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs7012822 chr8:124430463 G/A WDYHV1 chr8:124428965-124479470:+ 0.53 5.45 1.39E-6 Box Plot
ACC rs7013657 chr8:71637559 G/A XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs7014012 chr8:71672743 G/T XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs7015035 chr8:71653601 T/C XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs7017914 chr8:71591203 A/G XKR9 chr8:71581600-71702606:+ 0.68 6.86 8.24E-9 Box Plot
ACC rs7018381 chr8:71670117 T/C XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs701984 chr17:45901480 C/T SP6 chr17:45922274-45933240:- 0.63 5.54 1.0E-6 Box Plot
ACC rs71003207 chr6:86437481 CT/C SNHG5 chr6:86370668-86388454:- 0.69 5.42 1.58E-6 Box Plot
ACC rs71120290 chr14:64280778 A/AAACAACAACAAC SYNE2 chr14:64319701-64693151:+ 1.31 5.46 1.35E-6 Box Plot
ACC rs71156436 chr16:24788422 AGCAGCCACAGCC/A SLC5A11 chr16:24857162-24922949:+ 1.03 5.37 1.86E-6 Box Plot
ACC rs7115919 chr11:43776481 C/T HSD17B12 chr11:43702108-43878167:+ 0.49 5.83 3.59E-7 Box Plot